Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | RPAL_RS04295 | P46331 | Positive | 902578 - 903420 | 28825.5 |
| cytochrome p450 | RPAL_RS04300 | P9WPM6 | Negative | 903545 - 904924 | 50722.7 |
| adenylate/guanylate cyclase domain-containing protein | RPAL_RS04305 | P43524 | Negative | 905045 - 906349 | 46530.1 |
| zinc metalloprotease htpx | RPAL_RS04310 | B3QED3 | Positive | 906496 - 907470 | 34189.3 |
| mfs transporter | RPAL_RS04315 | P46105 | Positive | 907723 - 909138 | 48722.9 |
| alanine--glyoxylate aminotransferase family protein | RPAL_RS04320 | A1B8Z3 | Negative | 909135 - 910322 | 42512.0 |
| lssy c-terminal domain-containing protein | RPAL_RS04325 | Not Available | Negative | 910378 - 911232 | 31347.3 |
| thermonuclease family protein | RPAL_RS04330 | Not Available | Negative | 911266 - 911997 | 26804.4 |
| hypothetical protein | RPAL_RS04335 | Not Available | Negative | 912111 - 913850 | 63957.8 |
| caspase family protein | RPAL_RS04340 | Not Available | Positive | 914305 - 915171 | 30295.1 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
