Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RPAL_RS03995 | Q0SIB7 | Negative | 831160 - 831939 | 27381.1 |
| iron abc transporter permease | RPAL_RS04000 | B0R5G3 | Negative | 831936 - 832961 | 34434.5 |
| hoxn/hupn/nixa family nickel/cobalt transporter | RPAL_RS04005 | P23516 | Negative | 832969 - 834027 | 37955.5 |
| multidrug efflux smr transporter | RPAL_RS04010 | Not Available | Negative | 834360 - 834683 | 11062.0 |
| class i sam-dependent methyltransferase | RPAL_RS04015 | Not Available | Negative | 834680 - 835417 | 27377.1 |
| duf3419 family protein | RPAL_RS04020 | Not Available | Positive | 835570 - 836793 | 46256.3 |
| tade/tadg family type iv pilus assembly protein | RPAL_RS04025 | Not Available | Positive | 837348 - 838754 | 49313.8 |
| tade/tadg family type iv pilus assembly protein | RPAL_RS04030 | Not Available | Positive | 838765 - 839343 | 20684.0 |
| tade/tadg family type iv pilus assembly protein | RPAL_RS04035 | Not Available | Positive | 839356 - 840045 | 24058.2 |
| lysr family transcriptional regulator | RPAL_RS04040 | P30864 | Positive | 840576 - 841469 | 32597.9 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
