Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS03890 | Not Available | Positive | 813014 - 813208 | 7086.54 |
| hypothetical protein | RPAL_RS03895 | Not Available | Negative | 813501 - 814244 | 28241.7 |
| hypothetical protein | RPAL_RS28175 | Not Available | Negative | 814472 - 814756 | 10620.6 |
| hypothetical protein | RPAL_RS27965 | Not Available | Positive | 814756 - 815094 | 11873.6 |
| duf123 domain-containing protein | RPAL_RS03910 | Not Available | Positive | 815154 - 815630 | 16625.3 |
| divalent-cation tolerance protein cuta | RPAL_RS03915 | Q109R6 | Negative | 815608 - 815931 | 11862.2 |
| zinc ribbon domain-containing protein | RPAL_RS03920 | Not Available | Positive | 816031 - 816246 | 7319.85 |
| hypothetical protein | RPAL_RS03925 | Not Available | Positive | 816352 - 816864 | 17683.9 |
| ybhb/ybcl family raf kinase inhibitor-like protein | RPAL_RS03930 | P12994 | Positive | 817036 - 817524 | 16891.1 |
| 5,6-dimethylbenzimidazole synthase | RPAL_RS03940 | Q2RNG5 | Negative | 818074 - 818745 | 25002.8 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
