Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| actr/prra/rega family redox response regulator transcription factor | RPAL_RS02905 | A6UEL7 | Negative | 622923 - 623477 | 20140.2 |
| acts/prrb/regb family redox-sensitive histidine kinase | RPAL_RS02910 | P0C0Z0 | Negative | 623569 - 624891 | 48375.0 |
| abc transporter atp-binding protein | RPAL_RS02915 | Q13ZJ1 | Positive | 624999 - 625796 | 28939.9 |
| abc transporter permease | RPAL_RS02920 | Not Available | Positive | 625793 - 626623 | 31060.1 |
| polyhydroxyalkanoate depolymerase | RPAL_RS02925 | Not Available | Positive | 626762 - 628090 | 49788.7 |
| m48 family metallopeptidase | RPAL_RS02930 | Not Available | Positive | 628347 - 629180 | 31911.6 |
| transglycosylase domain-containing protein | RPAL_RS02935 | Q5FAC7 | Negative | 629453 - 631672 | 78868.9 |
| hypothetical protein | RPAL_RS02940 | Not Available | Positive | 631855 - 632106 | 9280.06 |
| hypothetical protein | RPAL_RS02945 | Not Available | Negative | 632202 - 632414 | 8091.58 |
| abc transporter substrate-binding protein | RPAL_RS02950 | Not Available | Negative | 632706 - 633926 | 44251.9 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
