Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | RPAL_RS02805 | Q8XUB6 | Positive | 603606 - 604913 | 45202.7 |
| bifunctional allantoicase/(s)-ureidoglycine aminohydrolase | RPAL_RS02810 | P75713 | Positive | 604951 - 605790 | 30421.1 |
| ureidoglycolate lyase | RPAL_RS02815 | Q11EH0 | Positive | 605787 - 606299 | 18297.9 |
| class i sam-dependent methyltransferase | RPAL_RS02820 | P20187 | Negative | 606349 - 606969 | 22292.2 |
| hnh endonuclease | RPAL_RS02825 | Not Available | Negative | 607089 - 607646 | 21317.3 |
| cysteine synthase a | RPAL_RS02830 | P0A535 | Positive | 607927 - 608925 | 34545.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | RPAL_RS02835 | Q89W81 | Negative | 608997 - 609914 | 33546.2 |
| pirin family protein | RPAL_RS02840 | P58114 | Negative | 609985 - 610902 | 33528.2 |
| malonyl-coa decarboxylase | RPAL_RS02845 | P12617 | Negative | 611033 - 612454 | 51730.4 |
| pas domain-containing protein | RPAL_RS02850 | Not Available | Negative | 612630 - 613235 | 22180.4 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
