Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | RPAL_RS02555 | B3QAH7 | Negative | 547256 - 548401 | 40394.6 |
| shikimate kinase | RPAL_RS02560 | Q6NCG8 | Negative | 548412 - 549014 | 21790.3 |
| hypothetical protein | RPAL_RS02565 | Not Available | Positive | 549153 - 549299 | 5231.62 |
| site-specific tyrosine recombinase xerd | RPAL_RS02570 | Q89XW5 | Positive | 549316 - 550335 | 37103.7 |
| cytochrome b | RPAL_RS02575 | Not Available | Negative | 550342 - 550917 | 21383.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | RPAL_RS02580 | Q6NCG4 | Positive | 551181 - 552143 | 34502.2 |
| murein l,d-transpeptidase family protein | RPAL_RS02585 | P0AAA0 | Positive | 552515 - 553951 | 51290.8 |
| preprotein translocase subunit seca | RPAL_RS02590 | Q6NCG2 | Negative | 554193 - 557033 | 106717.0 |
| peptidylprolyl isomerase | RPAL_RS02595 | Q1RI35 | Positive | 557376 - 558326 | 33856.2 |
| dna mismatch repair protein muts | RPAL_RS02600 | P61670 | Negative | 558419 - 561142 | 97353.0 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
