Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | RPAL_RS01395 | P69680 | Positive | 296733 - 298175 | 49792.0 |
| nucleotidyltransferase family protein | RPAL_RS01400 | Not Available | Positive | 298294 - 298641 | 12602.9 |
| duf86 domain-containing protein | RPAL_RS01405 | Q8RBR1 | Positive | 298734 - 298988 | 9616.49 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | RPAL_RS01410 | O66630 | Positive | 299111 - 300337 | 43927.4 |
| dna translocase ftsk | RPAL_RS01415 | Q89WR2 | Positive | 300351 - 302819 | 88916.5 |
| outer membrane lipoprotein carrier protein lola | RPAL_RS01420 | Not Available | Positive | 302837 - 303778 | 33904.1 |
| exodeoxyribonuclease iii | RPAL_RS01425 | Not Available | Positive | 304067 - 304879 | 31017.4 |
| cyclic nucleotide-binding domain-containing protein | RPAL_RS01430 | Not Available | Negative | 304931 - 305380 | 16150.5 |
| response regulator transcription factor | RPAL_RS01435 | A0QTK2 | Negative | 305420 - 306106 | 25117.1 |
| l,d-transpeptidase | RPAL_RS01440 | Not Available | Positive | 306271 - 306834 | 20606.0 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
