Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | RPAL_RS01345 | Q4UNK3 | Positive | 288238 - 289158 | 32813.2 |
| lon peptidase substrate-binding domain-containing protein | RPAL_RS01350 | Not Available | Positive | 289185 - 289862 | 24768.8 |
| trm112 family protein | RPAL_RS01355 | Q6ND40 | Positive | 289952 - 290149 | 7214.9 |
| ubiquinone biosynthesis hydroxylase | RPAL_RS01360 | Q2RMZ4 | Negative | 290285 - 291646 | 48717.8 |
| acyl-coa thioesterase ii | RPAL_RS01365 | P0AGG3 | Positive | 291745 - 292620 | 33196.9 |
| alpha/beta fold hydrolase | RPAL_RS01370 | Not Available | Negative | 292654 - 293487 | 30070.9 |
| tetr/acrr family transcriptional regulator | RPAL_RS01375 | P9WME0 | Positive | 293576 - 294157 | 20590.8 |
| p-ii family nitrogen regulator | RPAL_RS01380 | Not Available | Positive | 294303 - 294641 | 12362.2 |
| ammonium transporter | RPAL_RS01385 | Q07429 | Positive | 294818 - 296047 | 42834.8 |
| p-ii family nitrogen regulator | RPAL_RS01390 | O54053 | Positive | 296357 - 296695 | 12061.8 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
