Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS01195 | Not Available | Positive | 256772 - 257443 | 25660.7 |
| 3-isopropylmalate dehydratase large subunit | RPAL_RS01200 | B3Q851 | Negative | 257510 - 258919 | 50466.9 |
| 50s ribosomal protein l19 | RPAL_RS01205 | Q6ND68 | Negative | 259229 - 259618 | 14298.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | RPAL_RS01210 | B3Q854 | Negative | 259732 - 260478 | 26308.6 |
| ribosome maturation factor rimm | RPAL_RS01215 | B3Q855 | Negative | 260621 - 261151 | 18457.0 |
| 30s ribosomal protein s16 | RPAL_RS01220 | P62236 | Negative | 261164 - 261484 | 12149.7 |
| signal recognition particle protein | RPAL_RS01225 | P0AGD9 | Negative | 261654 - 263204 | 54701.5 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | RPAL_RS01230 | Not Available | Positive | 263657 - 263926 | 10179.4 |
| mbl fold metallo-hydrolase | RPAL_RS01235 | Q769K2 | Positive | 264152 - 265213 | 39388.8 |
| simpl domain-containing protein | RPAL_RS01240 | Not Available | Negative | 265223 - 265921 | 23875.8 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
