Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | RPAL_RS01045 | O66114 | Positive | 226209 - 227177 | 34554.5 |
| acetate--coa ligase | RPAL_RS01050 | Q07VK4 | Positive | 227541 - 229493 | 72404.8 |
| l,d-transpeptidase | RPAL_RS01055 | P0AAY0 | Positive | 229876 - 230403 | 18590.7 |
| ompa family protein | RPAL_RS26630 | Not Available | Negative | 230478 - 232532 | 70187.3 |
| hypothetical protein | RPAL_RS27950 | Not Available | Negative | 232778 - 233035 | 8627.06 |
| pyridoxamine 5'-phosphate oxidase family protein | RPAL_RS01070 | Not Available | Negative | 233035 - 233523 | 17992.2 |
| succinate dehydrogenase iron-sulfur subunit | RPAL_RS01075 | Q59662 | Negative | 233760 - 234542 | 29533.1 |
| succinate dehydrogenase flavoprotein subunit | RPAL_RS01080 | Q4UJM1 | Negative | 234650 - 236473 | 65948.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | RPAL_RS01085 | Not Available | Negative | 236477 - 236890 | 14720.7 |
| succinate dehydrogenase, cytochrome b556 subunit | RPAL_RS01090 | D0VWV4 | Negative | 236887 - 237285 | 14849.4 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
