Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | RPAL_RS11685 | Not Available | Negative | 2549453 - 2549821 | 13498.1 |
| pas domain s-box protein | RPAL_RS11690 | A5VUS1 | Negative | 2549818 - 2551719 | 70488.3 |
| esce/ysce/ssae family type iii secretion system needle protein co-chaperone | RPAL_RS11695 | Not Available | Negative | 2551807 - 2552004 | 7819.11 |
| hwe histidine kinase domain-containing protein | RPAL_RS11700 | Not Available | Negative | 2552147 - 2552824 | 24932.5 |
| crp/fnr family transcriptional regulator | RPAL_RS11705 | Not Available | Negative | 2552828 - 2553595 | 28661.9 |
| hypothetical protein | RPAL_RS28220 | Not Available | Positive | 2553883 - 2554005 | 4188.23 |
| duf892 family protein | RPAL_RS27165 | Not Available | Positive | 2554103 - 2554312 | 7518.9 |
| zinc-dependent alcohol dehydrogenase | RPAL_RS11715 | P47734 | Negative | 2554537 - 2555706 | 42189.1 |
| abc transporter substrate-binding protein | RPAL_RS11720 | Not Available | Positive | 2556246 - 2557085 | 29955.2 |
| uroporphyrinogen-iii c-methyltransferase | RPAL_RS11725 | C4LAG5 | Negative | 2557122 - 2557871 | 25823.1 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
