Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | RPAL_RS10840 | Not Available | Negative | 2364918 - 2365292 | 13161.9 |
| tigr02281 family clan aa aspartic protease | RPAL_RS10845 | Not Available | Negative | 2365480 - 2366016 | 18672.0 |
| duf1289 domain-containing protein | RPAL_RS10850 | Not Available | Negative | 2366039 - 2366263 | 8148.07 |
| hamp domain-containing sensor histidine kinase | RPAL_RS10855 | P37894 | Negative | 2366308 - 2367903 | 57693.0 |
| nad(p)-dependent oxidoreductase | RPAL_RS10860 | O33730 | Negative | 2368072 - 2368941 | 30294.3 |
| mrp/nbp35 family atp-binding protein | RPAL_RS10865 | Q9CWD8 | Positive | 2369250 - 2370362 | 38672.1 |
| trap transporter substrate-binding protein | RPAL_RS10870 | Q3J1R2 | Positive | 2370613 - 2371704 | 40076.6 |
| trap transporter large permease subunit | RPAL_RS10875 | Q9KQS1 | Negative | 2371893 - 2373734 | 66123.5 |
| trap transporter small permease subunit | RPAL_RS10880 | Not Available | Negative | 2373772 - 2374368 | 22151.6 |
| gtp 3',8-cyclase moaa | RPAL_RS10885 | B3QCQ7 | Negative | 2374542 - 2375576 | 37790.6 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
