Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | RPAL_RS09910 | Not Available | Negative | 2157281 - 2158321 | 36257.7 |
| marr family winged helix-turn-helix transcriptional regulator | RPAL_RS09915 | Not Available | Positive | 2158486 - 2159004 | 18847.1 |
| cation:proton antiporter | RPAL_RS09920 | P39830 | Negative | 2159141 - 2160871 | 61817.9 |
| duf3124 domain-containing protein | RPAL_RS09925 | Not Available | Positive | 2160983 - 2161504 | 18006.7 |
| adenylate/guanylate cyclase domain-containing protein | RPAL_RS09930 | P40137 | Positive | 2161624 - 2163198 | 57931.4 |
| glycerate kinase | RPAL_RS09935 | Q44472 | Negative | 2163440 - 2164720 | 43797.9 |
| abc transporter substrate-binding protein | RPAL_RS09940 | Not Available | Negative | 2164920 - 2166155 | 44332.9 |
| udgx family uracil-dna binding protein | RPAL_RS09945 | Not Available | Negative | 2166398 - 2167885 | 55517.6 |
| putative dna modification/repair radical sam protein | RPAL_RS09950 | Not Available | Negative | 2167982 - 2169232 | 46597.1 |
| imua family protein | RPAL_RS09955 | Not Available | Positive | 2169399 - 2170184 | 28156.5 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
