Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | RPAL_RS09860 | Not Available | Positive | 2146337 - 2146831 | 18991.6 |
| trap transporter large permease | RPAL_RS09865 | Not Available | Positive | 2146841 - 2148145 | 45738.1 |
| duf3237 domain-containing protein | RPAL_RS09870 | B3Q9N8 | Positive | 2148312 - 2148773 | 17009.6 |
| crotonase/enoyl-coa hydratase family protein | RPAL_RS09875 | Q5LLW6 | Positive | 2149101 - 2149877 | 27555.4 |
| feruloyl-coa synthase | RPAL_RS09880 | Not Available | Positive | 2149889 - 2151784 | 68053.8 |
| thioesterase family protein | RPAL_RS09885 | P56653 | Positive | 2152023 - 2152442 | 15869.1 |
| abc transporter substrate-binding protein | RPAL_RS09890 | Not Available | Positive | 2152522 - 2153679 | 40896.3 |
| ggdef domain-containing protein | RPAL_RS09895 | P54595 | Positive | 2153995 - 2154849 | 29895.3 |
| abc transporter atp-binding protein | RPAL_RS09900 | P0A192 | Negative | 2154787 - 2155506 | 25343.0 |
| abc transporter permease subunit | RPAL_RS09905 | Not Available | Negative | 2155503 - 2157275 | 62728.9 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
