Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS09810 | Not Available | Positive | 2135399 - 2135809 | 14680.4 |
| ompa family protein | RPAL_RS09815 | P37665 | Positive | 2136231 - 2137556 | 44879.1 |
| sdr family nad(p)-dependent oxidoreductase | RPAL_RS09820 | Not Available | Negative | 2137714 - 2138628 | 32529.1 |
| thiolase c-terminal domain-containing protein | RPAL_RS09825 | I6Y3T7 | Negative | 2138916 - 2140055 | 40513.1 |
| zn-ribbon domain-containing ob-fold protein | RPAL_RS09830 | D1AB77 | Negative | 2140061 - 2140474 | 15398.5 |
| amidase | RPAL_RS09835 | Q38M35 | Positive | 2140770 - 2142119 | 46879.2 |
| duf2848 domain-containing protein | RPAL_RS09840 | Not Available | Positive | 2142112 - 2142798 | 24295.1 |
| paai family thioesterase | RPAL_RS09845 | Not Available | Negative | 2142973 - 2143422 | 15561.9 |
| 4-hydroxybenzoate 3-monooxygenase | RPAL_RS09850 | P00438 | Negative | 2143761 - 2144933 | 43136.1 |
| trap transporter substrate-binding protein | RPAL_RS09855 | Not Available | Positive | 2145102 - 2146112 | 37082.4 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
