Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3307 domain-containing protein | RPAL_RS09510 | Not Available | Positive | 2064794 - 2065198 | 15226.1 |
| sensor domain-containing diguanylate cyclase | RPAL_RS09515 | Q8X8Q3 | Positive | 2065649 - 2067682 | 74004.2 |
| hypothetical protein | RPAL_RS09520 | Not Available | Negative | 2067887 - 2068273 | 14223.8 |
| hypothetical protein | RPAL_RS09525 | Not Available | Positive | 2068520 - 2068927 | 14741.3 |
| ykgj family cysteine cluster protein | RPAL_RS09530 | Not Available | Negative | 2068934 - 2069266 | 11830.2 |
| pyridoxamine 5'-phosphate oxidase family protein | RPAL_RS09535 | Not Available | Negative | 2069330 - 2069950 | 22842.1 |
| lysr family transcriptional regulator | RPAL_RS09540 | P67664 | Positive | 2070052 - 2070969 | 32640.6 |
| dna oxidative demethylase alkb | RPAL_RS09545 | P37462 | Positive | 2070966 - 2071616 | 23557.3 |
| phenylacetate--coa ligase paak | RPAL_RS09550 | Q9L9C1 | Negative | 2071623 - 2072954 | 49348.1 |
| hydroxyphenylacetyl-coa thioesterase paai | RPAL_RS09555 | P76084 | Negative | 2072969 - 2073442 | 16266.3 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
