Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS28205 | Not Available | Positive | 2033582 - 2033716 | 4538.67 |
| duf3095 domain-containing protein | RPAL_RS09375 | Not Available | Positive | 2033788 - 2034951 | 41051.6 |
| duf2147 domain-containing protein | RPAL_RS09380 | Not Available | Negative | 2034948 - 2035388 | 15224.2 |
| mate family efflux transporter | RPAL_RS09385 | Not Available | Negative | 2035520 - 2036893 | 46463.6 |
| mfs transporter | RPAL_RS09390 | O31444 | Positive | 2037168 - 2038403 | 42961.3 |
| superoxide dismutase | RPAL_RS09395 | Q9XD74 | Positive | 2038605 - 2039201 | 22544.5 |
| fluoride efflux transporter crcb | RPAL_RS09400 | P61394 | Positive | 2039354 - 2039728 | 13057.4 |
| helix-turn-helix domain-containing protein | RPAL_RS09405 | Not Available | Negative | 2039796 - 2040533 | 27544.1 |
| hypothetical protein | RPAL_RS27310 | Not Available | Positive | 2040867 - 2041031 | 5938.06 |
| pyridoxamine 5'-phosphate oxidase family protein | RPAL_RS09410 | Not Available | Positive | 2041076 - 2041711 | 22981.5 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
