Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | RPAL_RS08820 | Q6N9G0 | Negative | 1911781 - 1912398 | 23560.6 |
| hypothetical protein | RPAL_RS08825 | Not Available | Negative | 1912588 - 1913364 | 28402.9 |
| cupin domain-containing protein | RPAL_RS08830 | Not Available | Negative | 1913364 - 1913759 | 13624.6 |
| glutamate racemase | RPAL_RS08835 | A6U9N0 | Negative | 1913811 - 1914605 | 27994.1 |
| paai family thioesterase | RPAL_RS08840 | Not Available | Negative | 1914688 - 1915176 | 18041.5 |
| trpb-like pyridoxal phosphate-dependent enzyme | RPAL_RS08845 | O29028 | Positive | 1915331 - 1916695 | 49397.1 |
| toll/interleukin-1 receptor domain-containing protein | RPAL_RS08850 | P55546 | Positive | 1917033 - 1917983 | 35502.1 |
| hypothetical protein | RPAL_RS27690 | P55547 | Positive | 1917986 - 1918447 | 16633.1 |
| hypothetical protein | RPAL_RS08855 | Q8TL44 | Positive | 1918492 - 1918743 | 9030.57 |
| phosphoribosylformylglycinamidine synthase subunit purl | RPAL_RS08860 | B3Q7H9 | Positive | 1919146 - 1921356 | 78415.1 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
