Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | RPAL_RS08425 | Q2ISV3 | Negative | 1819636 - 1820682 | 38356.5 |
| alpha/beta fold hydrolase | RPAL_RS08430 | Not Available | Positive | 1820793 - 1821746 | 35284.9 |
| alpha/beta fold hydrolase bcho | RPAL_RS08435 | P26174 | Positive | 1821757 - 1822644 | 31704.0 |
| phytoene desaturase | RPAL_RS08440 | P54980 | Positive | 1822720 - 1824255 | 56719.8 |
| phytoene/squalene synthase family protein | RPAL_RS08445 | P17056 | Positive | 1824252 - 1825319 | 39481.9 |
| oxygen-dependent coproporphyrinogen oxidase | RPAL_RS08450 | B0T8D1 | Positive | 1825622 - 1826533 | 33734.8 |
| universal stress protein | RPAL_RS08455 | Not Available | Negative | 1826582 - 1827418 | 29181.9 |
| hypothetical protein | RPAL_RS28200 | Not Available | Positive | 1827719 - 1827853 | 5116.29 |
| carotenoid 1,2-hydratase | RPAL_RS08460 | Q7X3G5 | Negative | 1828029 - 1828982 | 36245.1 |
| 1-hydroxycarotenoid 3,4-desaturase crtd | RPAL_RS08465 | Q9JPB5 | Negative | 1828987 - 1830546 | 55342.2 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
