Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exem/nuch family extracellular endonuclease | RPAL_RS07780 | Q61503 | Positive | 1660415 - 1668742 | 281768.0 |
| deor/glpr family dna-binding transcription regulator | RPAL_RS07785 | Q51391 | Positive | 1669187 - 1669957 | 27798.3 |
| ig-like domain-containing protein | RPAL_RS28190 | Not Available | Positive | 1670106 - 1675244 | 174339.0 |
| molybdopterin-dependent oxidoreductase | RPAL_RS07795 | P17985 | Negative | 1675391 - 1676582 | 42000.5 |
| site-specific integrase | RPAL_RS28060 | Not Available | Negative | 1676675 - 1677721 | 40215.2 |
| hypothetical protein | RPAL_RS28065 | Not Available | Negative | 1677684 - 1678331 | 23968.7 |
| abc transporter substrate-binding protein | RPAL_RS07815 | Not Available | Positive | 1679823 - 1680887 | 38498.3 |
| abc transporter permease | RPAL_RS07820 | Not Available | Positive | 1680884 - 1682500 | 56788.1 |
| abc transporter atp-binding protein | RPAL_RS07825 | Not Available | Positive | 1682497 - 1683306 | 29067.4 |
| alkaline phosphatase family protein | RPAL_RS07830 | Q1M964 | Positive | 1683348 - 1685012 | 62949.0 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
