Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | RPAL_RS07190 | Not Available | Positive | 1527032 - 1527958 | 33324.7 |
| urea abc transporter permease subunit urtc | RPAL_RS07195 | Not Available | Positive | 1527973 - 1529124 | 41661.0 |
| urea abc transporter atp-binding protein urtd | RPAL_RS07200 | Not Available | Positive | 1529135 - 1529890 | 27817.8 |
| urea abc transporter atp-binding subunit urte | RPAL_RS07205 | P21630 | Positive | 1529901 - 1530590 | 24797.4 |
| formamidase | RPAL_RS07210 | Q50228 | Positive | 1530627 - 1531856 | 44365.9 |
| zinc ribbon domain-containing protein | RPAL_RS07215 | Not Available | Positive | 1532094 - 1532438 | 12441.0 |
| adenosylcobinamide-gdp ribazoletransferase | RPAL_RS07220 | A8ID91 | Negative | 1532553 - 1533350 | 26927.3 |
| hypothetical protein | RPAL_RS07225 | Not Available | Positive | 1533482 - 1533952 | 17106.8 |
| cation-transporting p-type atpase | RPAL_RS07230 | Not Available | Positive | 1534213 - 1536957 | 97633.9 |
| universal stress protein | RPAL_RS07235 | Not Available | Positive | 1537046 - 1537951 | 32660.4 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
