Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | RPAL_RS06450 | P00393 | Positive | 1363663 - 1364973 | 47546.3 |
| opgc domain-containing protein | RPAL_RS06455 | Not Available | Positive | 1365083 - 1366333 | 46726.6 |
| nuclear transport factor 2 family protein | RPAL_RS06460 | Not Available | Positive | 1366391 - 1366858 | 18393.3 |
| tetr/acrr family transcriptional regulator | RPAL_RS06465 | Not Available | Positive | 1366875 - 1367423 | 19568.6 |
| ycii family protein | RPAL_RS06470 | Q52996 | Positive | 1367573 - 1367944 | 13188.8 |
| rna polymerase sigma factor | RPAL_RS06475 | Q52997 | Positive | 1367941 - 1369209 | 46278.1 |
| sdr family nad(p)-dependent oxidoreductase | RPAL_RS06480 | Not Available | Negative | 1369230 - 1370018 | 27555.1 |
| duf2934 domain-containing protein | RPAL_RS26745 | Not Available | Positive | 1370259 - 1370435 | 6942.84 |
| ycii family protein | RPAL_RS06485 | Not Available | Positive | 1370940 - 1371356 | 15010.2 |
| tetr/acrr family transcriptional regulator | RPAL_RS06490 | Not Available | Positive | 1371495 - 1372199 | 25411.5 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
