Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase large subunit | RPAL_RS05815 | Q43959 | Positive | 1232158 - 1233267 | 38255.3 |
| hydrogenase maturation nickel metallochaperone hypa | RPAL_RS05820 | Q6NB57 | Positive | 1233260 - 1233601 | 12534.1 |
| hydrogenase nickel incorporation protein hypb | RPAL_RS05825 | P28155 | Positive | 1233601 - 1234557 | 33914.6 |
| carbamoyltransferase hypf | RPAL_RS05830 | P28156 | Positive | 1234562 - 1236835 | 80439.4 |
| hypc/hybg/hupf family hydrogenase formation chaperone | RPAL_RS05835 | P28157 | Positive | 1236835 - 1237068 | 8106.94 |
| hydrogenase formation protein hypd | RPAL_RS05840 | P40598 | Positive | 1237065 - 1238207 | 41158.6 |
| hydrogenase expression/formation protein hype | RPAL_RS05845 | P31906 | Positive | 1238204 - 1239250 | 36362.8 |
| sigma-54 dependent transcriptional regulator | RPAL_RS05850 | P31908 | Positive | 1239291 - 1240739 | 53727.7 |
| sensor histidine kinase | RPAL_RS05855 | Q9HWA7 | Positive | 1240729 - 1242081 | 48955.4 |
| pas domain s-box protein | RPAL_RS05860 | Not Available | Positive | 1242187 - 1244574 | 87929.2 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
