Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase small subunit | RPAL_RS05765 | P12635 | Positive | 1224638 - 1225750 | 40277.3 |
| nickel-dependent hydrogenase large subunit | RPAL_RS05770 | P12636 | Positive | 1225769 - 1227562 | 65601.3 |
| ni/fe-hydrogenase, b-type cytochrome subunit | RPAL_RS05775 | P21960 | Positive | 1227579 - 1228307 | 28031.4 |
| hyad/hybd family hydrogenase maturation endopeptidase | RPAL_RS05780 | Q45251 | Positive | 1228435 - 1229022 | 20888.0 |
| hupe/urej family protein | RPAL_RS05785 | P27650 | Positive | 1229036 - 1229629 | 19250.2 |
| hypc/hybg/hupf family hydrogenase formation chaperone | RPAL_RS05790 | Q45252 | Positive | 1229651 - 1229953 | 11021.2 |
| hydrogenase accessory protein | RPAL_RS05795 | P48339 | Positive | 1230174 - 1230575 | 14005.9 |
| hydrogenase expression/formation protein | RPAL_RS05800 | P48340 | Positive | 1230572 - 1231438 | 30654.4 |
| rubredoxin | RPAL_RS05805 | P48344 | Positive | 1231435 - 1231647 | 7716.92 |
| [nife]-hydrogenase assembly chaperone hybe | RPAL_RS05810 | P48341 | Positive | 1231637 - 1232161 | 18477.1 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
