Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside 2-deoxyribosyltransferase | RPAL_RS05125 | Not Available | Negative | 1084153 - 1084716 | 20275.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | RPAL_RS05130 | Q6NB76 | Negative | 1084939 - 1086864 | 68807.7 |
| exodeoxyribonuclease vii small subunit | RPAL_RS05135 | Q6NB75 | Negative | 1087279 - 1087530 | 9273.96 |
| histone deacetylase family protein | RPAL_RS05140 | P72702 | Negative | 1087613 - 1088542 | 33242.3 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | RPAL_RS05145 | P54602 | Negative | 1088648 - 1090330 | 58551.3 |
| hypothetical protein | RPAL_RS05150 | Not Available | Positive | 1090550 - 1091026 | 16969.4 |
| crotonase/enoyl-coa hydratase family protein | RPAL_RS05155 | Q9WUR2 | Negative | 1091065 - 1091826 | 27598.4 |
| acyl-coa dehydrogenase | RPAL_RS05160 | Q5LLW7 | Negative | 1092033 - 1093814 | 62120.2 |
| Trna-gln | Not Available | Not Available | Positive | 1094029 - 1094103 | Not Available |
| duf6538 domain-containing protein | RPAL_RS05170 | Not Available | Positive | 1094206 - 1096179 | 74961.1 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
