Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system pemk/mazf family toxin | RPAL_RS05075 | Not Available | Negative | 1074092 - 1074415 | 11460.1 |
| antitoxin maze family protein | RPAL_RS05080 | Not Available | Negative | 1074412 - 1074696 | 10639.7 |
| phosphoglycerate kinase | RPAL_RS05085 | P62419 | Negative | 1074795 - 1075991 | 41914.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | RPAL_RS05090 | P51009 | Negative | 1076213 - 1077220 | 35958.3 |
| transketolase | RPAL_RS05095 | P51010 | Negative | 1077436 - 1079421 | 70391.0 |
| duf4164 domain-containing protein | RPAL_RS05100 | Not Available | Positive | 1079749 - 1080093 | 12395.3 |
| cell division protein zapa | RPAL_RS05105 | Not Available | Positive | 1080090 - 1080500 | 14447.2 |
| class i sam-dependent rna methyltransferase | RPAL_RS05110 | Q6NB80 | Negative | 1080635 - 1081876 | 44263.8 |
| mate family efflux transporter | RPAL_RS05115 | Q6NB79 | Negative | 1081923 - 1083347 | 49855.2 |
| tlya family rna methyltransferase | RPAL_RS05120 | P19672 | Negative | 1083410 - 1084150 | 25978.4 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
