Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | RPAL_RS04395 | Not Available | Positive | 925050 - 925985 | 33305.0 |
| outer membrane protein | RPAL_RS04400 | Not Available | Negative | 926137 - 927486 | 47387.7 |
| abc transporter substrate-binding protein | RPAL_RS04405 | Not Available | Positive | 927881 - 929050 | 42521.7 |
| ligase-associated dna damage response dexh box helicase | RPAL_RS04410 | Q57742 | Positive | 929226 - 931952 | 99460.7 |
| ligase-associated dna damage response endonuclease pdem | RPAL_RS04415 | Not Available | Positive | 932089 - 932739 | 23015.5 |
| lysr family transcriptional regulator | RPAL_RS04420 | P16931 | Negative | 932884 - 933747 | 31374.8 |
| dmt family transporter | RPAL_RS04425 | Not Available | Positive | 933846 - 934766 | 31995.1 |
| nramp family divalent metal transporter | RPAL_RS04430 | Not Available | Positive | 934891 - 936198 | 46227.1 |
| tigr02186 family protein | RPAL_RS04435 | Not Available | Negative | 936363 - 937163 | 29564.0 |
| sulfite exporter taue/safe family protein | RPAL_RS04440 | Q9PFB4 | Negative | 937160 - 938083 | 32363.3 |
Pathways
21 pathways
Health Effects
No health effects information available for this bacterium.
