Rhizobium etli CIAT 652

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium etli CIAT 652 is a Gram-negative, rod-shaped bacterium that is classified as an aerobe, requiring oxygen for growth. This organism is characterized by its single-cell arrangement and the presence of flagella, which grants it mobility. Rhizobium etli CIAT 652 is nonsporulating and exists in a symbiotic relationship, primarily associated with host plants, particularly legumes. This bacterium is mesophilic, thriving in moderate temperature ranges. It possesses four replicons and is enclosed by two membranes, which is typical of Gram-negative bacteria. Importantly, Rhizobium etli CIAT 652 has been identified in multiple accessions, including NC_010994.1, NC_010996.1, NC_010997.1, and NC_010998.1, indicating a well-characterized genetic background. The ecological role of Rhizobium etli CIAT 652 is significant due to its symbiotic association with legumes, where it aids in nitrogen fixation. This process is crucial for enhancing soil fertility, allowing legumes to thrive in nutrient-poor environments. As a non-pathogenic organism, Rhizobium etli CIAT 652 contributes positively to agricultural ecosystems by promoting plant growth and improving soil health. The understanding of its traits can provide insights into sustainable agricultural practices and the development of biofertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium etli
StrainCIAT 652

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium etli CIAT 652
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Rhizobium etli CIAT 652 plasmid pA, complete sequence.

Gene Summary

Adenine Count

77101 bp

Thymine Count

79341 bp

Guanine Count

130851 bp

Cytosine Count

126797 bp

Genome Length

414090 bp

Protein-coding Genes

386 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-dependent oxidoreductaseRHECIAT_RS00465Q99LB7Positive99556 - 10200689601.8
mannitol dehydrogenase family proteinRHECIAT_RS00470P77260Negative102290 - 10374752848.1
glucuronate isomeraseRHECIAT_RS00475B4RGF5Negative103744 - 10515952052.9
slyx family proteinRHECIAT_RS00480Q8UJ19Positive105340 - 1055498222.77
nad-dependent succinate-semialdehyde dehydrogenaseRHECIAT_RS00485P55653Negative105596 - 10707752100.6
4-aminobutyrate--2-oxoglutarate transaminaseRHECIAT_RS00490P50457Negative107135 - 10841545363.8
merr family transcriptional regulatorRHECIAT_RS00495Not AvailablePositive108579 - 10938529583.6
ribonuclease dRHECIAT_RS00500Not AvailablePositive109491 - 11011722990.3
hypothetical proteinRHECIAT_RS00505Not AvailablePositive110390 - 11194054821.0
30s ribosomal protein s1RHECIAT_RS00510P14129Negative112019 - 11372262358.3

Displaying genes 921 – 930 of 5263 in total

Metabolites

1733 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1733 metabolites

Health Effects

No health effects information available for this bacterium.