Rhizobium etli CIAT 652

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium etli CIAT 652 is a Gram-negative, rod-shaped bacterium that is classified as an aerobe, requiring oxygen for growth. This organism is characterized by its single-cell arrangement and the presence of flagella, which grants it mobility. Rhizobium etli CIAT 652 is nonsporulating and exists in a symbiotic relationship, primarily associated with host plants, particularly legumes. This bacterium is mesophilic, thriving in moderate temperature ranges. It possesses four replicons and is enclosed by two membranes, which is typical of Gram-negative bacteria. Importantly, Rhizobium etli CIAT 652 has been identified in multiple accessions, including NC_010994.1, NC_010996.1, NC_010997.1, and NC_010998.1, indicating a well-characterized genetic background. The ecological role of Rhizobium etli CIAT 652 is significant due to its symbiotic association with legumes, where it aids in nitrogen fixation. This process is crucial for enhancing soil fertility, allowing legumes to thrive in nutrient-poor environments. As a non-pathogenic organism, Rhizobium etli CIAT 652 contributes positively to agricultural ecosystems by promoting plant growth and improving soil health. The understanding of its traits can provide insights into sustainable agricultural practices and the development of biofertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium etli
StrainCIAT 652

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium etli CIAT 652
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Rhizobium etli CIAT 652, complete sequence.

Gene Summary

Adenine Count

866396 bp

Thymine Count

863778 bp

Guanine Count

1374416 bp

Cytosine Count

1408734 bp

Genome Length

4513324 bp

Protein-coding Genes

4325 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhe_pe00001 family proteinRHECIAT_RS21685P55388Positive171 - 130441730.9
bax inhibitor-1/ycca family proteinRHECIAT_RS21690Q9ZE15Negative1426 - 213626031.1
anti-sigma factorRHECIAT_RS21695Not AvailableNegative2157 - 292427514.8
sigma-70 family rna polymerase sigma factorRHECIAT_RS21700B3Q6P8Negative2911 - 345020408.2
hypothetical proteinRHECIAT_RS21705Not AvailablePositive3627 - 393511382.6
cu(i)-responsive transcriptional regulatorRHECIAT_RS21710Q9X5V4Negative3941 - 433014698.4
heavy metal translocating p-type atpaseRHECIAT_RS21715Q9X5V3Negative4340 - 685987536.5
malto-oligosyltrehalose synthaseRHECIAT_RS21720Q44315Negative6948 - 955495746.9
penicillin-binding protein 1cRHECIAT_RS21725P76577Negative9635 - 1171674405.9
alpha-2-macroglobulin family proteinRHECIAT_RS21730Q9PDX7Negative11713 - 17187196617.0

Displaying genes 1 – 10 of 5263 in total

Metabolites

1909 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 1909 metabolites

Health Effects

No health effects information available for this bacterium.