Methylacidiphilum infernorum V4

Non-motileAerobic

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Methylacidiphilae

Order

Methylacidiphilales

Family

Methylacidiphilaceae

Genus

Methylacidiphilum (ex Ratnadevi et al. 2023)

Description

Methylacidiphilum infernorum V4 is a specialized thermophilic bacterium that functions as an autotroph and methanotroph, utilizing methane as its primary energy source. This organism thrives in aerobic environments, indicating a requirement for oxygen in its metabolic processes. Methylacidiphilum infernorum V4 is characterized by the presence of two membranes and has a single replicon, which is typical of many bacteria. This species is free-living and does not exhibit pathogenicity, suggesting that it does not cause disease in other organisms. Unlike motile bacteria, Methylacidiphilum infernorum V4 lacks mobility, although it possesses flagella, which may serve a role in attachment or other functions rather than locomotion. The ecological role of Methylacidiphilum infernorum V4 is significant in its ability to oxidize methane, a potent greenhouse gas. By converting methane into carbon dioxide in thermophilic environments, it contributes to the mitigation of greenhouse gas emissions. This process not only aids in regulating atmospheric methane levels but also supports carbon cycling in ecosystems where this bacterium is present, highlighting its importance in both microbial ecology and climate regulation. The accession number for Methylacidiphilum infernorum V4 is NC_010794.1, which provides a reference for genetic and genomic studies related to this organism.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassMethylacidiphilae
OrderMethylacidiphilales
FamilyMethylacidiphilaceae
GenusMethylacidiphilum (ex Ratnadevi et al. 2023)
SpeciesCandidatus Methylacidiphilum infernorum
StrainV4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceAutotroph- Methanotroph
PathogenicityNo

Genome Summary

Methylacidiphilum infernorum V4


Gene Summary

Adenine Count

622605 bp

Thymine Count

624283 bp

Guanine Count

516290 bp

Cytosine Count

523967 bp

Genome Length

2287145 bp

Protein-coding Genes

2079 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaMINF_RS00005Not AvailablePositive251 - 161551542.6
dna polymerase iii subunit betaMINF_RS00010Not AvailablePositive1822 - 293741842.3
hypothetical proteinMINF_RS00015Not AvailablePositive2950 - 333615182.0
signal peptidase iiMINF_RS00020Not AvailablePositive3421 - 390618788.2
quinolinate synthase nadaMINF_RS00025Not AvailablePositive3909 - 485035459.3
rna ligase partner proteinMINF_RS00030Not AvailablePositive4886 - 549422836.5
rna ligaseMINF_RS00035Not AvailableNegative5456 - 655642510.5
udp-glucose dehydrogenase family proteinMINF_RS00040Not AvailablePositive6854 - 814347927.5
adenylosuccinate synthaseMINF_RS00045Not AvailablePositive8155 - 942346791.3
isoprenyl transferaseMINF_RS00050Not AvailablePositive9606 - 1038829833.7

Displaying genes 1 – 10 of 2131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

36 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm0003116all-trans-undecaprenyl diphosphateC55H89O7P2Chemical structure of all-trans-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.6099999Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da

Displaying 1–10 of 36 metabolites

Health Effects

No health effects information available for this bacterium.