Methylacidiphilum infernorum V4

Non-motileAerobic

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Methylacidiphilae

Order

Methylacidiphilales

Family

Methylacidiphilaceae

Genus

Methylacidiphilum (ex Ratnadevi et al. 2023)

Description

Methylacidiphilum infernorum V4 is a specialized thermophilic bacterium that functions as an autotroph and methanotroph, utilizing methane as its primary energy source. This organism thrives in aerobic environments, indicating a requirement for oxygen in its metabolic processes. Methylacidiphilum infernorum V4 is characterized by the presence of two membranes and has a single replicon, which is typical of many bacteria. This species is free-living and does not exhibit pathogenicity, suggesting that it does not cause disease in other organisms. Unlike motile bacteria, Methylacidiphilum infernorum V4 lacks mobility, although it possesses flagella, which may serve a role in attachment or other functions rather than locomotion. The ecological role of Methylacidiphilum infernorum V4 is significant in its ability to oxidize methane, a potent greenhouse gas. By converting methane into carbon dioxide in thermophilic environments, it contributes to the mitigation of greenhouse gas emissions. This process not only aids in regulating atmospheric methane levels but also supports carbon cycling in ecosystems where this bacterium is present, highlighting its importance in both microbial ecology and climate regulation. The accession number for Methylacidiphilum infernorum V4 is NC_010794.1, which provides a reference for genetic and genomic studies related to this organism.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassMethylacidiphilae
OrderMethylacidiphilales
FamilyMethylacidiphilaceae
GenusMethylacidiphilum (ex Ratnadevi et al. 2023)
SpeciesCandidatus Methylacidiphilum infernorum
StrainV4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceAutotroph- Methanotroph
PathogenicityNo

Genome Summary

Methylacidiphilum infernorum V4


Gene Summary

Adenine Count

622605 bp

Thymine Count

624283 bp

Guanine Count

516290 bp

Cytosine Count

523967 bp

Genome Length

2287145 bp

Protein-coding Genes

2079 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidate cytidylyltransferaseMINF_RS00055Not AvailablePositive10440 - 1133033556.5
phosphatidylserine decarboxylase family proteinMINF_RS00060Not AvailablePositive11358 - 1200524377.0
cdp-diacylglycerol--serine o-phosphatidyltransferaseMINF_RS00065Not AvailablePositive12002 - 1288633624.2
Trna-tyrNot AvailableNot AvailablePositive12981 - 13063Not Available
kama family radical sam proteinMINF_RS00075Not AvailablePositive13146 - 1433945791.7
class i sam-dependent rrna methyltransferaseMINF_RS00080Not AvailablePositive14360 - 1555945348.7
phosphoenolpyruvate synthaseMINF_RS00085Not AvailablePositive15773 - 1822391862.2
bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferaseMINF_RS00090Not AvailablePositive18248 - 20968100122.0
Trna-valNot AvailableNot AvailablePositive20997 - 21071Not Available
parb/repb/spo0j family partition proteinMINF_RS00100Not AvailablePositive21226 - 2209832668.6

Displaying genes 11 – 20 of 2131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

36 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm0003116all-trans-undecaprenyl diphosphateC55H89O7P2Chemical structure of all-trans-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.6099999Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da

Displaying 1–10 of 36 metabolites

Health Effects

No health effects information available for this bacterium.