Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macro domain-containing protein | VEIS_RS04455 | B7UP19 | Positive | 1010591 - 1011661 | 40073.3 |
| gmc family oxidoreductase | VEIS_RS04460 | Not Available | Negative | 1011937 - 1013607 | 61540.0 |
| aldose 1-epimerase | VEIS_RS04465 | P76584 | Negative | 1013846 - 1014733 | 33037.9 |
| sdr family oxidoreductase | VEIS_RS04470 | Q5P5I4 | Negative | 1014736 - 1015506 | 27491.9 |
| atp-binding cassette domain-containing protein | VEIS_RS04475 | Not Available | Negative | 1015523 - 1016344 | 29697.1 |
| abc transporter permease | VEIS_RS04480 | Q2PBL9 | Negative | 1016341 - 1017309 | 33429.3 |
| sugar abc transporter substrate-binding protein | VEIS_RS04485 | Q4J710 | Negative | 1017322 - 1018302 | 34740.8 |
| mandelate racemase/muconate lactonizing enzyme family protein | VEIS_RS04490 | Q8XVS8 | Negative | 1018382 - 1019578 | 44038.4 |
| fadr/gntr family transcriptional regulator | VEIS_RS25475 | Not Available | Negative | 1019589 - 1020308 | 25938.2 |
| smp-30/gluconolactonase/lre family protein | VEIS_RS04500 | Q9I923 | Positive | 1020378 - 1021298 | 33117.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
