Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl coa:acetate/3-ketoacid coa transferase | VEIS_RS04315 | P37766 | Positive | 983386 - 984891 | 52665.3 |
| gmc family oxidoreductase | VEIS_RS04320 | Not Available | Positive | 984983 - 986644 | 59747.4 |
| sugar abc transporter substrate-binding protein | VEIS_RS04325 | A0QYB3 | Positive | 986857 - 987855 | 35209.3 |
| abc transporter permease | VEIS_RS04330 | P36948 | Positive | 987852 - 988847 | 34373.1 |
| sugar abc transporter atp-binding protein | VEIS_RS04335 | Q82CM5 | Positive | 988857 - 990350 | 54376.3 |
| abc transporter permease | VEIS_RS04340 | Not Available | Positive | 990358 - 991317 | 32122.2 |
| hypothetical protein | VEIS_RS04345 | Not Available | Positive | 991322 - 991504 | 6573.13 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS04350 | Not Available | Negative | 991492 - 992478 | 34843.0 |
| ldh family oxidoreductase | VEIS_RS04355 | Q1QWN5 | Negative | 992515 - 993528 | 34971.2 |
| hydroxyacid dehydrogenase | VEIS_RS04360 | Q1QWN6 | Negative | 993528 - 994454 | 31787.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
