Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid synthesis family protein | VEIS_RS04185 | Not Available | Positive | 950614 - 951285 | 23602.6 |
| amino acid synthesis family protein | VEIS_RS04190 | Not Available | Positive | 951476 - 952060 | 20031.4 |
| abc transporter substrate-binding protein | VEIS_RS04195 | Not Available | Positive | 952213 - 953385 | 42892.4 |
| is110 family transposase | VEIS_RS04200 | Not Available | Negative | 953402 - 954367 | 34887.0 |
| abc transporter permease | VEIS_RS04205 | Not Available | Positive | 954617 - 956506 | 66625.3 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30205 | P45073 | Positive | 956512 - 957072 | 19887.2 |
| abc transporter atp-binding protein | VEIS_RS30210 | Not Available | Positive | 957397 - 958113 | 26112.9 |
| bifunctional nicotinamidase/pyrazinamidase | VEIS_RS04215 | P21369 | Positive | 958186 - 958908 | 25779.7 |
| hypothetical protein | VEIS_RS28235 | Not Available | Positive | 958918 - 959262 | 12096.5 |
| tetratricopeptide repeat protein | VEIS_RS04225 | Not Available | Positive | 959375 - 960466 | 40918.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
