Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | VEIS_RS00390 | A1WE12 | Negative | 92152 - 93558 | 51210.3 |
| outer membrane protein assembly factor bamb | VEIS_RS00395 | Q63UT0 | Negative | 93574 - 94767 | 40590.3 |
| tetratricopeptide repeat protein | VEIS_RS00400 | O87406 | Negative | 94764 - 95444 | 24751.2 |
| histidine--trna ligase | VEIS_RS00405 | A1W578 | Negative | 95455 - 96720 | 46694.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | VEIS_RS00410 | P58669 | Negative | 96793 - 98118 | 47263.0 |
| helix-turn-helix domain-containing protein | VEIS_RS00415 | Not Available | Negative | 98118 - 98990 | 28636.3 |
| type iv pilus biogenesis/stability protein pilw | VEIS_RS00420 | Not Available | Negative | 98983 - 99756 | 28419.5 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | VEIS_RS00425 | A1WE19 | Negative | 99996 - 101171 | 42746.7 |
| nucleoside-diphosphate kinase | VEIS_RS00430 | A1WE20 | Negative | 101185 - 101610 | 15491.7 |
| pseudouridine synthase | VEIS_RS00435 | Q8FHV4 | Negative | 101730 - 103292 | 55112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
