Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| swim zinc finger family protein | VEIS_RS03940 | Not Available | Negative | 892004 - 893104 | 39240.4 |
| nadp-dependent malic enzyme | VEIS_RS03945 | Q9ZFV8 | Positive | 893501 - 895807 | 82481.6 |
| nad(p)/fad-dependent oxidoreductase | VEIS_RS03950 | P81383 | Positive | 896021 - 897625 | 59089.8 |
| cytochrome c | VEIS_RS03955 | Not Available | Positive | 897671 - 898063 | 13734.4 |
| rida family protein | VEIS_RS03960 | Not Available | Positive | 898085 - 898585 | 17540.5 |
| dead/deah box helicase | VEIS_RS03965 | P94593 | Negative | 898760 - 901531 | 100628.0 |
| hypothetical protein | VEIS_RS29550 | Not Available | Negative | 901802 - 902077 | 10442.9 |
| fad-dependent oxidoreductase | VEIS_RS03970 | Q8PDQ6 | Positive | 902103 - 903542 | 52383.6 |
| abc transporter permease | VEIS_RS03975 | Not Available | Positive | 903539 - 904513 | 35466.0 |
| abc transporter permease | VEIS_RS03980 | Not Available | Positive | 904579 - 905514 | 33709.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
