Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxa | VEIS_RS03175 | Q9X2T1 | Negative | 721769 - 722104 | 12119.6 |
| pd-(d/e)xk nuclease family protein | VEIS_RS03180 | Not Available | Positive | 722295 - 725117 | 100976.0 |
| exodeoxyribonuclease v subunit beta | VEIS_RS03185 | A4IKW7 | Positive | 725114 - 728536 | 123282.0 |
| gntr family transcriptional regulator | VEIS_RS03190 | Not Available | Positive | 728961 - 729713 | 27100.3 |
| methylisocitrate lyase | VEIS_RS03195 | P54528 | Negative | 729691 - 730605 | 32124.0 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | VEIS_RS03200 | Q937N6 | Negative | 730619 - 732076 | 53399.0 |
| hypothetical protein | VEIS_RS28170 | Not Available | Positive | 732699 - 732968 | 9634.06 |
| methylenetetrahydrofolate reductase | VEIS_RS03205 | P11003 | Negative | 733014 - 733865 | 30532.3 |
| tlya family rna methyltransferase | VEIS_RS03210 | P9WJ62 | Negative | 733862 - 734617 | 26446.3 |
| adenosylhomocysteinase | VEIS_RS03215 | B1Y647 | Negative | 734691 - 736112 | 51451.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
