Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VEIS_RS03040 | Q9K9G6 | Negative | 689832 - 690596 | 27791.3 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS03045 | Not Available | Negative | 690634 - 691632 | 34723.9 |
| hypothetical protein | VEIS_RS28145 | Not Available | Negative | 691755 - 691913 | 5712.98 |
| tetr/acrr family transcriptional regulator | VEIS_RS03050 | Not Available | Negative | 691913 - 692563 | 24784.7 |
| gamma-glutamyltransferase | VEIS_RS03055 | P54422 | Positive | 692753 - 694627 | 64517.0 |
| nadp-dependent isocitrate dehydrogenase | VEIS_RS03060 | P16100 | Negative | 694677 - 696914 | 82063.9 |
| fad-linked oxidase c-terminal domain-containing protein | VEIS_RS03065 | P0AEQ0 | Positive | 697205 - 698740 | 54524.0 |
| pmeii family type ii restriction endonuclease | VEIS_RS03070 | Not Available | Negative | 698805 - 699539 | 28138.6 |
| site-specific dna-methyltransferase | VEIS_RS03075 | P11409 | Negative | 699553 - 700377 | 31999.6 |
| bon domain-containing protein | VEIS_RS03080 | P45301 | Negative | 700652 - 701311 | 23305.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
