Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | VEIS_RS02620 | Q9F9B0 | Negative | 606290 - 607114 | 29070.0 |
| abc transporter permease | VEIS_RS02625 | Q9F9B1 | Negative | 607114 - 608082 | 33471.0 |
| sugar abc transporter substrate-binding protein | VEIS_RS02630 | Not Available | Negative | 608248 - 609261 | 34482.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | VEIS_RS02635 | Not Available | Positive | 609589 - 609870 | 10526.9 |
| sugar abc transporter substrate-binding protein | VEIS_RS02640 | Q9F9B2 | Negative | 609901 - 610914 | 34443.9 |
| is110 family transposase | VEIS_RS02645 | Not Available | Positive | 611144 - 612094 | 34218.1 |
| pfkb family carbohydrate kinase | VEIS_RS02650 | P42720 | Positive | 612238 - 613233 | 34414.4 |
| amidohydrolase family protein | VEIS_RS02655 | P40896 | Negative | 613303 - 614550 | 43865.0 |
| gaf domain-containing protein | VEIS_RS02660 | Not Available | Negative | 614636 - 615136 | 18820.6 |
| mfs transporter | VEIS_RS02665 | P76230 | Negative | 615133 - 616503 | 50148.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
