Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | VEIS_RS02525 | P0ADX3 | Positive | 587254 - 587703 | 15597.7 |
| hypothetical protein | VEIS_RS27550 | Not Available | Positive | 587730 - 587882 | 5388.66 |
| duf3579 domain-containing protein | VEIS_RS02530 | Not Available | Positive | 588066 - 588392 | 12262.8 |
| hypothetical protein | VEIS_RS02535 | Not Available | Negative | 588419 - 588607 | 6580.85 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS02540 | Not Available | Positive | 588623 - 589597 | 34490.8 |
| hypothetical protein | VEIS_RS29515 | P05103 | Positive | 589613 - 590059 | 15240.2 |
| paer7i family type ii restriction endonuclease | VEIS_RS02550 | P05104 | Positive | 590086 - 590466 | 13822.4 |
| laci family dna-binding transcriptional regulator | VEIS_RS02555 | Q8DAQ5 | Negative | 590580 - 591602 | 36523.4 |
| glycoside hydrolase family 172 protein | VEIS_RS02560 | Not Available | Positive | 591859 - 592965 | 41225.5 |
| abc transporter permease | VEIS_RS02565 | Not Available | Positive | 592993 - 593982 | 36175.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
