Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | VEIS_RS02485 | P06710 | Negative | 576989 - 578833 | 65092.1 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 578922 - 579017 | Not Available |
| glyoxylate/hydroxypyruvate reductase a | VEIS_RS02490 | A8GD46 | Positive | 579021 - 579947 | 33365.3 |
| 3-keto-5-aminohexanoate cleavage protein | VEIS_RS02495 | B0VHH0 | Negative | 580092 - 581057 | 34136.6 |
| hydroxymethylglutaryl-coa lyase | VEIS_RS02500 | Q9I2A0 | Positive | 581184 - 582095 | 32051.6 |
| ybak/ebsc family protein | VEIS_RS02505 | Not Available | Positive | 582161 - 582685 | 18190.9 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30170 | Not Available | Positive | 582862 - 583107 | 8896.69 |
| 2-hydroxychromene-2-carboxylate isomerase | VEIS_RS02510 | Not Available | Positive | 583287 - 583943 | 23602.2 |
| mfs transporter | VEIS_RS02515 | Not Available | Positive | 584143 - 585804 | 59093.7 |
| is110 family transposase | VEIS_RS02520 | Not Available | Negative | 585821 - 586786 | 34887.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
