Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | VEIS_RS24315 | P9WH76 | Positive | 5557038 - 5559479 | 88595.0 |
| flavin reductase family protein | VEIS_RS24320 | Q6Q271 | Negative | 5559499 - 5559942 | 15791.9 |
| d-amino acid dehydrogenase | VEIS_RS24325 | Q479B1 | Negative | 5560276 - 5561622 | 48415.9 |
| lysr family transcriptional regulator argp | VEIS_RS24330 | P70773 | Positive | 5561754 - 5562671 | 32717.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | VEIS_RS24335 | A1WSU0 | Negative | 5562675 - 5564147 | 51219.5 |
| membrane protein insertase yidc | VEIS_RS24340 | B2U820 | Negative | 5564144 - 5565847 | 63257.2 |
| membrane protein insertion efficiency factor yidd | VEIS_RS27490 | Q21QM3 | Negative | 5565844 - 5566149 | 11123.7 |
| ribonuclease p protein component | VEIS_RS24345 | Not Available | Negative | 5566146 - 5566529 | 14212.5 |
| 50s ribosomal protein l34 | VEIS_RS24350 | A1TWI9 | Negative | 5566598 - 5566732 | 5138.5 |
| zeta toxin family protein | VEIS_RS24375 | Not Available | Positive | 130 - 1227 | 39696.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
