Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | VEIS_RS24270 | Q47149 | Negative | 5546260 - 5546532 | 10529.7 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | VEIS_RS24275 | A0A140ND86 | Negative | 5546532 - 5546792 | 9347.31 |
| duf2442 domain-containing protein | VEIS_RS24280 | Not Available | Positive | 5547028 - 5547252 | 7943.49 |
| xanthine dehydrogenase molybdopterin binding subunit | VEIS_RS24285 | Q9MYW6 | Negative | 5547333 - 5549603 | 81286.6 |
| xanthine dehydrogenase small subunit | VEIS_RS24290 | P91711 | Negative | 5549816 - 5551354 | 55006.4 |
| abc transporter atp-binding protein | VEIS_RS24295 | D4GPW3 | Positive | 5551571 - 5553154 | 55754.1 |
| abc transporter permease | VEIS_RS24300 | D4GPW2 | Positive | 5553147 - 5554220 | 37794.5 |
| abc transporter permease | VEIS_RS24305 | D4GPW1 | Positive | 5554335 - 5555252 | 31778.8 |
| bmp family abc transporter substrate-binding protein | VEIS_RS24310 | Q2YKI6 | Positive | 5555317 - 5556465 | 40673.2 |
| hypothetical protein | VEIS_RS29460 | Not Available | Positive | 5556465 - 5557016 | 19723.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
