Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methanol/ethanol family pqq-dependent dehydrogenase | VEIS_RS24125 | P29968 | Positive | 5502373 - 5504199 | 66207.6 |
| c-type cytochrome | VEIS_RS24130 | P04369 | Positive | 5504282 - 5504686 | 14629.8 |
| substrate-binding domain-containing protein | VEIS_RS24135 | Not Available | Positive | 5504770 - 5505609 | 30932.1 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS31405 | Not Available | Positive | 5505713 - 5506174 | 16461.8 |
| abc transporter atp-binding protein | VEIS_RS24140 | P94440 | Positive | 5506338 - 5507105 | 27413.3 |
| pqq-dependent catabolism-associated beta-propeller protein | VEIS_RS24145 | Not Available | Positive | 5507116 - 5508117 | 35869.8 |
| abc transporter substrate-binding protein | VEIS_RS24150 | Not Available | Positive | 5508134 - 5509330 | 43329.8 |
| abc transporter permease | VEIS_RS24155 | Not Available | Positive | 5509339 - 5510163 | 30070.9 |
| xaa-pro peptidase family protein | VEIS_RS24160 | Not Available | Negative | 5510181 - 5511566 | 51720.9 |
| flavodoxin family protein | VEIS_RS24165 | A0A0H2ZDT7 | Negative | 5511749 - 5512306 | 19548.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
