Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS31010 | Not Available | Positive | 5465048 - 5465857 | 29080.3 |
| duf2339 domain-containing protein | VEIS_RS23990 | Not Available | Positive | 5465760 - 5469533 | 134240.0 |
| duf3999 domain-containing protein | VEIS_RS23995 | Not Available | Positive | 5469530 - 5471017 | 51737.1 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS31015 | Not Available | Positive | 5471080 - 5471229 | 5463.46 |
| duf1097 family protein | VEIS_RS24005 | Not Available | Positive | 5471705 - 5472193 | 16564.8 |
| aldehyde dehydrogenase | VEIS_RS24010 | P25553 | Positive | 5472280 - 5473716 | 51849.4 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | VEIS_RS24015 | Q9X807 | Positive | 5473721 - 5474338 | 21069.5 |
| methanol/ethanol family pqq-dependent dehydrogenase | VEIS_RS24020 | Q8GR64 | Positive | 5474397 - 5476130 | 63034.5 |
| sigma-54-dependent fis family transcriptional regulator | VEIS_RS24025 | P28614 | Positive | 5476271 - 5478271 | 72250.8 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS29435 | Not Available | Positive | 5478306 - 5478512 | 8241.96 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
