Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | VEIS_RS23945 | A1WSL6 | Positive | 5455493 - 5456875 | 50380.2 |
| dna-3-methyladenine glycosylase | VEIS_RS23950 | Q92383 | Positive | 5456924 - 5457628 | 25993.5 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | VEIS_RS23955 | B2U9Q0 | Positive | 5457755 - 5458732 | 36409.6 |
| trna lysidine(34) synthetase tils | VEIS_RS23960 | A1VRB1 | Positive | 5458734 - 5459684 | 34182.9 |
| aspartate kinase | VEIS_RS23965 | Q88EI9 | Positive | 5459857 - 5461125 | 45806.1 |
| Trna-ser | Not Available | Not Available | Positive | 5461155 - 5461247 | Not Available |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS31000 | Not Available | Positive | 5461485 - 5461574 | 3378.04 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS31005 | Not Available | Negative | 5461731 - 5462841 | 39957.0 |
| type ii toxin-antitoxin system hipa family toxin | VEIS_RS23980 | Not Available | Negative | 5463025 - 5464329 | 47861.7 |
| helix-turn-helix transcriptional regulator | VEIS_RS23985 | Not Available | Negative | 5464329 - 5464652 | 11702.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
