Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | VEIS_RS23860 | Not Available | Negative | 5439765 - 5440895 | 39930.4 |
| hypothetical protein | VEIS_RS27355 | Not Available | Negative | 5441028 - 5441363 | 11610.0 |
| dna polymerase iii subunit chi | VEIS_RS23870 | Not Available | Negative | 5441363 - 5441797 | 16167.3 |
| leucyl aminopeptidase | VEIS_RS23875 | A1WSK3 | Negative | 5441794 - 5443353 | 53678.4 |
| lps export abc transporter permease lptf | VEIS_RS23880 | P45333 | Positive | 5443483 - 5444601 | 40655.1 |
| lps export abc transporter permease lptg | VEIS_RS23885 | P0ADC7 | Positive | 5444598 - 5445707 | 41168.3 |
| sirohydrochlorin chelatase | VEIS_RS23890 | Not Available | Positive | 5445727 - 5446110 | 13434.4 |
| cysb family hth-type transcriptional regulator | VEIS_RS23895 | B4E8V9 | Positive | 5446117 - 5447058 | 34995.3 |
| pyridoxal phosphate-dependent aminotransferase | VEIS_RS23900 | P77806 | Positive | 5447079 - 5448260 | 42554.2 |
| hypothetical protein | VEIS_RS29420 | Not Available | Positive | 5448384 - 5448548 | 6254.78 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
