Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | VEIS_RS23615 | P41399 | Negative | 5387794 - 5388933 | 40567.3 |
| diguanylate cyclase domain-containing protein | VEIS_RS23620 | Not Available | Negative | 5389215 - 5391329 | 76501.5 |
| crp/fnr family transcriptional regulator | VEIS_RS23625 | Not Available | Negative | 5391507 - 5392130 | 22695.0 |
| molybdopterin-dependent oxidoreductase | VEIS_RS23630 | C0SP82 | Negative | 5392260 - 5394320 | 74774.2 |
| abc transporter substrate-binding protein | VEIS_RS23635 | Not Available | Positive | 5394515 - 5395651 | 40408.3 |
| isas1 family transposase | VEIS_RS30975 | Q8X7R5 | Negative | 5395757 - 5396101 | 12688.6 |
| isas1 family transposase | VEIS_RS30980 | P75741 | Negative | 5396147 - 5396569 | 15263.0 |
| isas1 family transposase | VEIS_RS30985 | P22644 | Negative | 5396476 - 5396907 | 16081.5 |
| hypothetical protein | VEIS_RS23650 | Not Available | Negative | 5397230 - 5398936 | 62178.9 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS23655 | Not Available | Positive | 5399313 - 5400152 | 30158.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
