Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS23250 | Q44018 | Positive | 5296589 - 5297530 | 32617.7 |
| cupin domain-containing protein | VEIS_RS23255 | Not Available | Positive | 5297533 - 5298066 | 19048.0 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS23260 | Not Available | Negative | 5298560 - 5299573 | 35788.9 |
| coa ester lyase | VEIS_RS23265 | A3PN16 | Negative | 5299920 - 5300789 | 29705.0 |
| mmge/prpd family protein | VEIS_RS23270 | Not Available | Negative | 5300786 - 5302159 | 47835.1 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS23275 | Not Available | Negative | 5302313 - 5303305 | 34517.8 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS23280 | Not Available | Negative | 5303843 - 5304895 | 36645.9 |
| caib/baif coa-transferase family protein | VEIS_RS23285 | Q68FU4 | Negative | 5305052 - 5306233 | 42004.1 |
| acyl-coa dehydrogenase family protein | VEIS_RS23290 | Q2LQN9 | Negative | 5306245 - 5307417 | 43552.0 |
| maoc family dehydratase n-terminal domain-containing protein | VEIS_RS23295 | A9WC41 | Negative | 5307457 - 5308506 | 38014.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
