Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VEIS_RS22930 | Q5PGP4 | Negative | 5223936 - 5225438 | 55580.8 |
| lysr family transcriptional regulator | VEIS_RS22935 | Not Available | Positive | 5225726 - 5226643 | 33861.4 |
| aspartate/glutamate racemase family protein | VEIS_RS22940 | O58403 | Negative | 5227039 - 5227779 | 25795.3 |
| transporter substrate-binding domain-containing protein | VEIS_RS22945 | Q9ZF60 | Negative | 5227805 - 5228695 | 32216.9 |
| d-amino acid dehydrogenase | VEIS_RS22950 | Q8XX54 | Positive | 5228904 - 5230130 | 42759.7 |
| pepsy domain-containing protein | VEIS_RS22955 | Not Available | Negative | 5230063 - 5231637 | 57239.5 |
| tonb-dependent siderophore receptor | VEIS_RS22960 | P16869 | Negative | 5231654 - 5233834 | 78681.4 |
| duf2946 family protein | VEIS_RS22965 | Not Available | Negative | 5233957 - 5234313 | 11973.0 |
| smr family transporter | VEIS_RS30930 | O69279 | Negative | 5234355 - 5234546 | 6363.04 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30935 | Not Available | Negative | 5234546 - 5234716 | 6322.78 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
